Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939258.1_cds_XP_016483921.1_74987
CDS Infomation

[gene=LOC107804525] [db_xref=GeneID:107804525] [protein=homeobox-leucine zipper protein HOX11-like] [protein_id=XP_016483921.1] [location=join(43651..44041,44494..44837,44949..45028,45411..45816)] [gbkey=CDS]
Sequence

ATGGAGCTTGGATTAAGCTTAGGAGATACTAACACTAATACTACTACTGCAACAGCAGCA
GCAGCTTCTTCAAAATCATTTTTCTTGTCAAAGAACATTAAAACTTCATCTTCTGATCAG
AACCATAGTAAGAAGAAGAGAAAGGGTTTAGGGTTTTGCATGGCTTTGGGAATTAACTCA
TCAAATGGAAAAGTCCAAGAACAACATGATGATGATGATGATGAAGAAAATCCAGAAAAA
TCTCATGATGATGAAGATGATGAAGGCGATGAGCATACATCTGAAGAAGGGAATATTAAT
GGGAATACACCAGTTCAGCTTGATCTTCTCCCTCTTGCTCCTGTTCCTCGCCGTAGTTTT
CCTCAGTCCCTCCATTGGTCTTCTGATAATGGAAGTTCTGAGAATGGTTCGTCCGGTAAC
GGGGGGCTGCCGGCGGCGAGGGGGTTCGATGTGAACAGGGTTCCGGCGGCGGGTACGGAA
GAAGTTTCATCTCCAAACAGTATAGCGTCGTCGTTTCGGATGGATTTTGGTCTTTTTAGG
TCTGCTAATATTATTGGGAATAAACGGAACTCGGACTCCGGCGGAGGAAACGACGGCGGT
GAACCGGAAAGAGCATCTTCAAGAGCAAGTGATGAAGATGAAAATGGTGTTAATACTCGC
AAAAAACTTAGGTTGTCAAAAGAACAATCAGCTTATCTTGAAGAAAGTTTCAAAGAACAC
CACACTCTTAATCCTAAGCAAAAGCTGGCACTTGCCAAACAGCTAAATCTAAGGCCAAGA
CAAGTTGAAGTCTGGTTTCAGAATAGAAGAGCAAGGACTAAGTTGAAGCAAACTGAAGTG
GATTGTGAGTATTTGAAGAGATGTTGTGAGACATTAACTGAAGAAAACAGAAGGCTACAC
AAAGAACTTCAAGAATTGAGAGCTTTGAAAAGTTCTAATCCATTTTACATGCAACTTCCG
GCCACCACTTTAACTATGTGTCCGTCTTGTGAAAGGGTGGCTACCACCACCTCCGCCACC
GCTGCTCCTCCCACCACCGCCGCCGGTACCACCACTCCCAAAGCCCCAACCCCTATCCCC
ACTACTACTATCACCACCACCACCACTACTAGTGACTCTATTCCTAAAGCTATTCCATTC
CTTAATTCTAGACCAAGATTTTTCCCATTTAATACCACCACTAATAGTCCCAACCATCCA
CATCAATCTGCAGCCTCGTAA

Peptide Sequence

PEP ID

XP_016483921.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein HOX11-like [Nicotiana tabacum]
Sequence

MELGLSLGDTNTNTTTATAAAASSKSFFLSKNIKTSSSDQNHSKKKRKGLGFCMALGINS
SNGKVQEQHDDDDDEENPEKSHDDEDDEGDEHTSEEGNINGNTPVQLDLLPLAPVPRRSF
PQSLHWSSDNGSSENGSSGNGGLPAARGFDVNRVPAAGTEEVSSPNSIASSFRMDFGLFR
SANIIGNKRNSDSGGGNDGGEPERASSRASDEDENGVNTRKKLRLSKEQSAYLEESFKEH
HTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLH
KELQELRALKSSNPFYMQLPATTLTMCPSCERVATTTSATAAPPTTAAGTTTPKAPTPIP
TTTITTTTTTSDSIPKAIPFLNSRPRFFPFNTTTNSPNHPHQSAAS

Transcript Sequence

Gene sequence data has not been registered.